tag:blogger.com,1999:blog-3017697080484068141.post8153697827781151279..comments2023-10-08T04:37:34.635-07:00Comments on No DNA Control: More alignments!Changhttp://www.blogger.com/profile/12291718994939895064noreply@blogger.comBlogger2125tag:blogger.com,1999:blog-3017697080484068141.post-16984400017250094302009-09-09T16:21:26.369-07:002009-09-09T16:21:26.369-07:00I think we have to assume that the contig assembly...I think we have to assume that the contig assembly is right... at least as much as we trust the "complete" genomes. It's possible that they could've closed some of the gaps in their contigs, but were using strict criteria. I noticed while slogging through the alignments in MAUVE that a large number of the contig breakpoints were at rRNA operons, and it makes sense that they wouldn't be able to close these gaps with the 454 technology they used.Changhttps://www.blogger.com/profile/12291718994939895064noreply@blogger.comtag:blogger.com,1999:blog-3017697080484068141.post-76282407291710108772009-09-01T06:02:46.587-07:002009-09-01T06:02:46.587-07:00Are we pretty cnfident that there are no assembly ...Are we pretty cnfident that there are no assembly errors within individual contigs?Rosie Redfieldhttps://www.blogger.com/profile/06807912674127645263noreply@blogger.com